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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902525.1_cds_XP_016452566.1_46794
CDS Infomation

[gene=LOC107777099] [db_xref=GeneID:107777099] [protein=non-lysosomal glucosylceramidase-like] [protein_id=XP_016452566.1] [location=join(16008..16088,16744..16854,16959..17015,17117..17193,17288..17387,19766..19839,20443..20543,20632..20735,21734..21787,21887..21942,22033..22071,23031..23169,23373..23557,23956..24023,24114..24186,25300..25361,26221..27418,28363..28612)] [gbkey=CDS]
Sequence

ATGGTGAGTGGAACTTTGTTTCATTGTAGAAAGAACTCATGGCCACCTGAAGAATATATC
AGTAAAGCAACTTTACAATTGTTTGATTTTGATAGTGCTGCACCACCATCTCAAGCTTGG
AGAAGGAAACTAAATAGTCATGCTAGCAAGTTAAAAGAATTTAGTGTAACATTCACGGAG
GCAATAAAAATGGTTCGGCTTGGTATACGTCTATGGTCATATGTAAGGGAAGAAGCATCC
TATGGAAGGAAAGCTCCAATTGATCCCTTTACACGAGAACGCTGCAAACCATCAGCATCT
CAGGGTGTTCCACTTGGAGGGATGGGGAGCGGCAGCATATCCAGAGGCTTCAGAGGCGAG
TTCAAGCACTTCCAGATTCTTCCTGGAACATGTGAGACTTCTCCAATCATGGCCAATCAG
TTCTCAATTTTTATATCCCGGGATGGAGGAAACAAAAAGTATGCATCCGTTTTATCTCCG
GGAGAACATGAAGGGCTAGGGAAAGTAAGTGATCATGGTATATCGTCGTGGGGCTGGAAT
CTGAGTGGACAGCATTCTACATATCATGCACTCTTTCCTAGGGCTTGGACAGTATATGAT
GGTGAACCAGACCCAGAACTGAAAGTTTCTTGTCGGCAAATATCACCATTCATCCCACAT
GACTACAGAGAGAGCAGTCTTCCTACATCTGTTTTTGTTTACACTTTGGTGAACACTGGG
AAGGAAAGGGCACAAGTTAGCCTTCTTCTTACATGGGCGAATTCAATTGGAGGTGTCTCA
CACCTATCAGGAGATCACGTGAACGAACCATTTATAGGTGAAGATGGAGTCTCTGGCGTA
CTCCTACATCACAAGACAAAAGAAAATCCTCCTGTTACTTTCGCTGTAGCTGCATGCGAA
ACTCAGAATGTCAGCGTTACTGTTTTACCCTGTTTCGGCCTGGCTGAGGGAAGCTGTGTA
ACAGCAAAGGATATGTGGGGTAAAATGGTTGAGGATGGGCATTTTGATCGAGAGAACTTC
AGCAGAGGACCAAGCATGCCATCATCACCTGGGGAGACACATTGTGCTGCAGTTTCTGCA
TCCGCATGGGTTGAACCACATGGAAAATGTACCGTGGCATTTGCTGTTGCTTGGTCATCT
CCTCAAGTTAAATTCATGAAAGGAAAGTCATATTATAGGAGGTACACACGGTTCTATGGA
ACTTCTGAAAGGGCTGCTGTAGATTTGGTTCATCATTCTTTGACAAATTATAAGCTGTGG
GAAGAAGAAATTGAAAAATGGCAGAATCCTATCCTTAATGATGTTAGGCTACCAGAATGG
TACAAGTTTACACTGTTTAACGAGCTGTATTTTCTGGTGGCTGGTGGAACATTGTGGATT
GACTCTGGTGTTCCTTCTTCAGACTCGGTTAGTACCAGAATAAAGAGACCGAGCAATGAA
GTCAAAGTAACTAAAGTCAAATCGAATTATAAAAATGGTGTACAAGTGGAACAGACGGCA
TATAATGGTTATGGGGAAGACAACCATTTCTCAAGTTCTGATAAGATTTCAGAATCAATT
ATTACTGACAGTGATGATGTGGGTAGGTTTCTATACTTGGAAGGTGTAGAATATATTATG
TGGTGTACATATGATGTGCACTTCTATGCCTCTTTTGCACTTCTTGCTTTATTTCCTAAA
ATTGAGCTCAGCATCCAGCGGGAGTTTGCCAAAGCAGTCTTGTGTGAAGATGGAAGAAAA
GTGAAGTTTCTGGCAGAGGGTAATTGGGGAATACGGAAGGCGAGGGGGGCTATTCCTCAC
GATCTTGGAATGCATGATCCTTGGCACGAAATGAATGCCTATAACATACATGATACTAGT
AAATGGAAGGATCTAAATCCGAAGTTTGTGCTTCAGGTATATAGGGACTTTGCTGCAACG
GGAGATTTCTCCTTTGCTACAGATGTCTGGCCTTCTGTATGTGCTGCAATTGAATATATG
GATCAATTTGATCGTGACAATGATGGTCTAATTGAAAACGATGGTTTCCCTGATCAAACG
TATGATACATGGACGGTTCACGGAATAAGTGCTTACTGTGGTGGTTTATGGCTAGCTGCA
CTACAAGCTGCAGCTGCAATGGCCATGCACGTAGGTGACTACGCCTTTGCAGAAAAATGC
AAAGGTAGATTGATAAAAGCCAAGACAGTGTTTGAGGCAAAATTGTGGAACGGCTCATAT
TTTAACTATGACAGTGGATCTAGTAGCAACAGTAAGTCAATTCAGGCCGATCAGCTCGCT
GGACAGTGGTACATGGCTTCATCCGGCTTGCCCGATCTCTTCGATGGCGTAAAGATCAAG
AGTACTCTTCAAAAAATTTATGACTTCAATGTCATGAAAGTTCGTGGTGGCAGAATGGGT
GCAGTAAATGGAATGCATCCAAATGGAAAGGTGGATGAGACTTGCATGCAATCCCGCGAG
ATATGGACTGGTGTCACGTATGGTTTGGCTGCTACCATGCTTCATGCTGGTATGGAGGAG
CAGGCGTTCACTACAGCTGAAGGCATATTCATTGCAGGCTGGTCAGAGGATGGCTTTGGA
TACTCATTTCAAACGCCTGAAGGTTGGACGATGGATGGACATTTTCGATCTCTGATATAT
ATGAGGCCTCTCTCAATTTGGGGCATGCAGTGGGCGTTATCGATGCCTAAGACAATCCTT
GATGCCCCCAAGATCAATATAATGGACAGAATTCAAGTGTCCCCCTACACTCCTCAGGAG
ACGGGCGTCCGGAAAATAGTAGAAAAAGCTAAATGTTTCAACGGTTCTATCTTTCGCTGT
TCTTGCTAA

Peptide Sequence

PEP ID

XP_016452566.1
PEP Infomation

PREDICTED: non-lysosomal glucosylceramidase-like [Nicotiana tabacum]
Sequence

MVSGTLFHCRKNSWPPEEYISKATLQLFDFDSAAPPSQAWRRKLNSHASKLKEFSVTFTE
AIKMVRLGIRLWSYVREEASYGRKAPIDPFTRERCKPSASQGVPLGGMGSGSISRGFRGE
FKHFQILPGTCETSPIMANQFSIFISRDGGNKKYASVLSPGEHEGLGKVSDHGISSWGWN
LSGQHSTYHALFPRAWTVYDGEPDPELKVSCRQISPFIPHDYRESSLPTSVFVYTLVNTG
KERAQVSLLLTWANSIGGVSHLSGDHVNEPFIGEDGVSGVLLHHKTKENPPVTFAVAACE
TQNVSVTVLPCFGLAEGSCVTAKDMWGKMVEDGHFDRENFSRGPSMPSSPGETHCAAVSA
SAWVEPHGKCTVAFAVAWSSPQVKFMKGKSYYRRYTRFYGTSERAAVDLVHHSLTNYKLW
EEEIEKWQNPILNDVRLPEWYKFTLFNELYFLVAGGTLWIDSGVPSSDSVSTRIKRPSNE
VKVTKVKSNYKNGVQVEQTAYNGYGEDNHFSSSDKISESIITDSDDVGRFLYLEGVEYIM
WCTYDVHFYASFALLALFPKIELSIQREFAKAVLCEDGRKVKFLAEGNWGIRKARGAIPH
DLGMHDPWHEMNAYNIHDTSKWKDLNPKFVLQVYRDFAATGDFSFATDVWPSVCAAIEYM
DQFDRDNDGLIENDGFPDQTYDTWTVHGISAYCGGLWLAALQAAAAMAMHVGDYAFAEKC
KGRLIKAKTVFEAKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYMASSGLPDLFDGVKIK
STLQKIYDFNVMKVRGGRMGAVNGMHPNGKVDETCMQSREIWTGVTYGLAATMLHAGMEE
QAFTTAEGIFIAGWSEDGFGYSFQTPEGWTMDGHFRSLIYMRPLSIWGMQWALSMPKTIL
DAPKINIMDRIQVSPYTPQETGVRKIVEKAKCFNGSIFRCSC

Transcript Sequence

Gene sequence data has not been registered.